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DRX475490: Richau2023_33B
1 ILLUMINA (Illumina MiSeq) run: 57,471 spots, 11.8M bases, 6.8Mb downloads

Submitted by: INCA
Study: BRCA1, BRCA2, TP53 germline and somatic variants and clinicopathological characteristics of Brazilian patients with epithelial ovarian cancer
show Abstracthide Abstract
The project included female patients diagnosed with epithelial ovarian cancer, presenting tumor biopsies with < 60% of malignant cells and paired with blood samples. Genetic material (DNA) was isolated from tumor and blood samples, amplified for BRCA1, BRCA2, TP53 genes by polymerase chain reaction (PCR) and sequenced by massive parallel sequencing. These sequencing was performed in a single run on the MiSeq platform (Illumina, San Diego, Estados Unidos), with 150Ã?150 paired end reads.Samples from 56 patients were included at DDBJ database. Sample alias indicates patient by number followed by B (blood) or T (tumor) according to tissue of origin.
Sample: Human Female diagnosed with epithelial ovarian cancer (Richau2023_33 B)
SAMD00628452 • DRS394416 • All experiments • All runs
Organism: Homo sapiens
Library:
Name: EOC (Richau2023_33B)
Instrument: Illumina MiSeq
Strategy: AMPLICON
Source: GENOMIC
Selection: PCR
Layout: PAIRED
Construction protocol: Nextera XT DNA Library Preparation Kit according to manufacturer's instructions
Pipeline: show...hide...
StepPrev Step
1NIL
Runs: 1 run, 57,471 spots, 11.8M bases, 6.8Mb
Run# of Spots# of BasesSizePublished
DRR49128357,47111.8M6.8Mb2024-07-01

ID:
33515057

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